[857] | 1 | //
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| 2 | //=======================================================================
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| 3 | // Copyright 1997, 1998, 1999, 2000 University of Notre Dame.
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| 4 | // Authors: Andrew Lumsdaine, Lie-Quan Lee, Jeremy G. Siek
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| 5 | // Doug Gregor, D. Kevin McGrath
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| 6 | //
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| 7 | // This file is part of the Boost Graph Library
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| 8 | //
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| 9 | // You should have received a copy of the License Agreement for the
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| 10 | // Boost Graph Library along with the software; see the file LICENSE.
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| 11 | // If not, contact Office of Research, University of Notre Dame, Notre
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| 12 | // Dame, IN 46556.
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| 13 | //
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| 14 | // Permission to modify the code and to distribute modified code is
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| 15 | // granted, provided the text of this NOTICE is retained, a notice that
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| 16 | // the code was modified is included with the above COPYRIGHT NOTICE and
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| 17 | // with the COPYRIGHT NOTICE in the LICENSE file, and that the LICENSE
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| 18 | // file is distributed with the modified code.
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| 19 | //
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| 20 | // LICENSOR MAKES NO REPRESENTATIONS OR WARRANTIES, EXPRESS OR IMPLIED.
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| 21 | // By way of example, but not limitation, Licensor MAKES NO
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| 22 | // REPRESENTATIONS OR WARRANTIES OF MERCHANTABILITY OR FITNESS FOR ANY
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| 23 | // PARTICULAR PURPOSE OR THAT THE USE OF THE LICENSED SOFTWARE COMPONENTS
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| 24 | // OR DOCUMENTATION WILL NOT INFRINGE ANY PATENTS, COPYRIGHTS, TRADEMARKS
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| 25 | // OR OTHER RIGHTS.
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| 26 | //=======================================================================
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| 27 | //
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| 28 | #ifndef BOOST_GRAPH_KING_HPP
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| 29 | #define BOOST_GRAPH_KING_HPP
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| 30 |
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| 31 | #include <boost/config.hpp>
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| 32 | #include <boost/graph/detail/sparse_ordering.hpp>
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| 33 |
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| 34 | /*
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| 35 | King Algorithm for matrix reordering
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| 36 | */
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| 37 |
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| 38 | namespace boost {
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| 39 | namespace detail {
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| 40 | template<typename OutputIterator, typename Buffer, typename Compare,
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| 41 | typename PseudoDegreeMap, typename VecMap, typename VertexIndexMap>
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| 42 | class bfs_king_visitor:public default_bfs_visitor
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| 43 | {
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| 44 | public:
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| 45 | bfs_king_visitor(OutputIterator *iter, Buffer *b, Compare compare,
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| 46 | PseudoDegreeMap deg, std::vector<int> loc, VecMap color,
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| 47 | VertexIndexMap vertices):
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| 48 | permutation(iter), Qptr(b), degree(deg), comp(compare),
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| 49 | Qlocation(loc), colors(color), vertex_map(vertices) { }
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| 50 |
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| 51 | template <typename Vertex, typename Graph>
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| 52 | void finish_vertex(Vertex, Graph& g) {
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| 53 | typename graph_traits<Graph>::out_edge_iterator ei, ei_end;
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| 54 | Vertex v, w;
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| 55 |
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| 56 | typedef typename std::deque<Vertex>::iterator iterator;
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| 57 | typedef typename std::deque<Vertex>::reverse_iterator reverse_iterator;
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| 58 |
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| 59 | reverse_iterator rend = Qptr->rend()-index_begin;
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| 60 | reverse_iterator rbegin = Qptr->rbegin();
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| 61 |
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| 62 |
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| 63 | //heap the vertices already there
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| 64 | std::make_heap(rbegin, rend, boost::bind<bool>(comp, _2, _1));
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| 65 |
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| 66 | int i = 0;
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| 67 |
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| 68 | for(i = index_begin; i != Qptr->size(); ++i){
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| 69 | colors[get(vertex_map, (*Qptr)[i])] = 1;
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| 70 | Qlocation[get(vertex_map, (*Qptr)[i])] = i;
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| 71 | }
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| 72 |
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| 73 | i = 0;
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| 74 |
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| 75 | for( ; rbegin != rend; rend--){
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| 76 | percolate_down<Vertex>(i);
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| 77 | w = (*Qptr)[index_begin+i];
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| 78 | for (tie(ei, ei_end) = out_edges(w, g); ei != ei_end; ++ei) {
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| 79 | v = target(*ei, g);
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| 80 | put(degree, v, get(degree, v) - 1);
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| 81 |
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| 82 | if (colors[get(vertex_map, v)] == 1) {
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| 83 | percolate_up<Vertex>(get(vertex_map, v), i);
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| 84 | }
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| 85 | }
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| 86 |
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| 87 | colors[get(vertex_map, w)] = 0;
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| 88 | i++;
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| 89 | }
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| 90 | }
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| 91 |
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| 92 | template <typename Vertex, typename Graph>
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| 93 | void examine_vertex(Vertex u, const Graph&) {
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| 94 |
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| 95 | *(*permutation)++ = u;
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| 96 | index_begin = Qptr->size();
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| 97 |
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| 98 | }
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| 99 | protected:
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| 100 |
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| 101 |
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| 102 | //this function replaces pop_heap, and tracks state information
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| 103 | template <typename Vertex>
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| 104 | void percolate_down(int offset){
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| 105 | typedef typename std::deque<Vertex>::reverse_iterator reverse_iterator;
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| 106 |
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| 107 | int heap_last = index_begin + offset;
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| 108 | int heap_first = Qptr->size() - 1;
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| 109 |
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| 110 | //pop_heap functionality:
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| 111 | //swap first, last
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| 112 | std::swap((*Qptr)[heap_last], (*Qptr)[heap_first]);
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| 113 |
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| 114 | //swap in the location queue
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| 115 | std::swap(Qlocation[heap_first], Qlocation[heap_last]);
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| 116 |
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| 117 | //set drifter, children
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| 118 | int drifter = heap_first;
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| 119 | int drifter_heap = Qptr->size() - drifter;
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| 120 |
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| 121 | int right_child_heap = drifter_heap * 2 + 1;
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| 122 | int right_child = Qptr->size() - right_child_heap;
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| 123 |
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| 124 | int left_child_heap = drifter_heap * 2;
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| 125 | int left_child = Qptr->size() - left_child_heap;
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| 126 |
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| 127 | //check that we are staying in the heap
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| 128 | bool valid = (right_child < heap_last) ? false : true;
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| 129 |
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| 130 | //pick smallest child of drifter, and keep in mind there might only be left child
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| 131 | int smallest_child = (valid && get(degree, (*Qptr)[left_child]) > get(degree,(*Qptr)[right_child])) ?
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| 132 | right_child : left_child;
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| 133 |
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| 134 | while(valid && smallest_child < heap_last && comp((*Qptr)[drifter], (*Qptr)[smallest_child])){
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| 135 |
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| 136 | //if smallest child smaller than drifter, swap them
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| 137 | std::swap((*Qptr)[smallest_child], (*Qptr)[drifter]);
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| 138 | std::swap(Qlocation[drifter], Qlocation[smallest_child]);
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| 139 |
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| 140 | //update the values, run again, as necessary
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| 141 | drifter = smallest_child;
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| 142 | drifter_heap = Qptr->size() - drifter;
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| 143 |
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| 144 | right_child_heap = drifter_heap * 2 + 1;
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| 145 | right_child = Qptr->size() - right_child_heap;
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| 146 |
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| 147 | left_child_heap = drifter_heap * 2;
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| 148 | left_child = Qptr->size() - left_child_heap;
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| 149 |
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| 150 | valid = (right_child < heap_last) ? false : true;
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| 151 |
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| 152 | smallest_child = (valid && get(degree, (*Qptr)[left_child]) > get(degree,(*Qptr)[right_child])) ?
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| 153 | right_child : left_child;
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| 154 | }
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| 155 |
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| 156 | }
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| 157 |
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| 158 |
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| 159 |
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| 160 | // this is like percolate down, but we always compare against the
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| 161 | // parent, as there is only a single choice
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| 162 | template <typename Vertex>
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| 163 | void percolate_up(int vertex, int offset){
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| 164 |
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| 165 | int child_location = Qlocation[vertex];
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| 166 | int heap_child_location = Qptr->size() - child_location;
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| 167 | int heap_parent_location = (int)(heap_child_location/2);
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| 168 | int parent_location = Qptr->size() - heap_parent_location;
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| 169 |
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| 170 | bool valid = (heap_parent_location != 0 && child_location > index_begin + offset &&
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| 171 | parent_location < Qptr->size());
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| 172 |
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| 173 | while(valid && comp((*Qptr)[child_location], (*Qptr)[parent_location])){
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| 174 |
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| 175 | //swap in the heap
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| 176 | std::swap((*Qptr)[child_location], (*Qptr)[parent_location]);
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| 177 |
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| 178 | //swap in the location queue
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| 179 | std::swap(Qlocation[child_location], Qlocation[parent_location]);
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| 180 |
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| 181 | child_location = parent_location;
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| 182 | heap_child_location = heap_parent_location;
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| 183 | heap_parent_location = (int)(heap_child_location/2);
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| 184 | parent_location = Qptr->size() - heap_parent_location;
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| 185 | valid = (heap_parent_location != 0 && child_location > index_begin + offset);
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| 186 | }
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| 187 | }
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| 188 |
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| 189 | OutputIterator *permutation;
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| 190 | int index_begin;
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| 191 | Buffer *Qptr;
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| 192 | PseudoDegreeMap degree;
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| 193 | Compare comp;
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| 194 | std::vector<int> Qlocation;
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| 195 | VecMap colors;
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| 196 | VertexIndexMap vertex_map;
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| 197 | };
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| 198 |
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| 199 |
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| 200 | } // namespace detail
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| 201 |
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| 202 |
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| 203 | template<class Graph, class OutputIterator, class ColorMap, class DegreeMap,
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| 204 | typename VertexIndexMap>
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| 205 | OutputIterator
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| 206 | king_ordering(const Graph& g,
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| 207 | std::deque< typename graph_traits<Graph>::vertex_descriptor >
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| 208 | vertex_queue,
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| 209 | OutputIterator permutation,
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| 210 | ColorMap color, DegreeMap degree,
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| 211 | VertexIndexMap index_map)
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| 212 | {
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| 213 | typedef typename property_traits<DegreeMap>::value_type DS;
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| 214 | typedef typename property_traits<ColorMap>::value_type ColorValue;
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| 215 | typedef color_traits<ColorValue> Color;
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| 216 | typedef typename graph_traits<Graph>::vertex_descriptor Vertex;
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| 217 | typedef iterator_property_map<typename std::vector<DS>::iterator, VertexIndexMap, DS, DS&> PseudoDegreeMap;
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| 218 | typedef indirect_cmp<PseudoDegreeMap, std::less<DS> > Compare;
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| 219 | typedef typename boost::sparse::sparse_ordering_queue<Vertex> queue;
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| 220 | typedef typename detail::bfs_king_visitor<OutputIterator, queue, Compare,
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| 221 | PseudoDegreeMap, std::vector<int>, VertexIndexMap > Visitor;
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| 222 | typedef typename graph_traits<Graph>::vertices_size_type
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| 223 | vertices_size_type;
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| 224 | std::vector<DS> pseudo_degree_vec(num_vertices(g));
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| 225 | PseudoDegreeMap pseudo_degree(pseudo_degree_vec.begin(), index_map);
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| 226 |
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| 227 | typename graph_traits<Graph>::vertex_iterator ui, ui_end;
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| 228 | queue Q;
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| 229 | // Copy degree to pseudo_degree
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| 230 | // initialize the color map
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| 231 | for (tie(ui, ui_end) = vertices(g); ui != ui_end; ++ui){
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| 232 | put(pseudo_degree, *ui, get(degree, *ui));
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| 233 | put(color, *ui, Color::white());
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| 234 | }
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| 235 |
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| 236 | Compare comp(pseudo_degree);
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| 237 | std::vector<int> colors(num_vertices(g));
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| 238 |
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| 239 | for(vertices_size_type i = 0; i < num_vertices(g); i++)
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| 240 | colors[i] = 0;
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| 241 |
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| 242 | std::vector<int> loc(num_vertices(g));
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| 243 |
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| 244 | //create the visitor
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| 245 | Visitor vis(&permutation, &Q, comp, pseudo_degree, loc, colors, index_map);
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| 246 |
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| 247 | while( !vertex_queue.empty() ) {
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| 248 | Vertex s = vertex_queue.front();
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| 249 | vertex_queue.pop_front();
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| 250 |
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| 251 | //call BFS with visitor
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| 252 | breadth_first_visit(g, s, Q, vis, color);
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| 253 | }
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| 254 |
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| 255 | return permutation;
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| 256 | }
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| 257 |
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| 258 |
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| 259 | // This is the case where only a single starting vertex is supplied.
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| 260 | template <class Graph, class OutputIterator,
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| 261 | class ColorMap, class DegreeMap, typename VertexIndexMap>
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| 262 | OutputIterator
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| 263 | king_ordering(const Graph& g,
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| 264 | typename graph_traits<Graph>::vertex_descriptor s,
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| 265 | OutputIterator permutation,
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| 266 | ColorMap color, DegreeMap degree, VertexIndexMap index_map)
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| 267 | {
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| 268 |
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| 269 | std::deque< typename graph_traits<Graph>::vertex_descriptor > vertex_queue;
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| 270 | vertex_queue.push_front( s );
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| 271 | return king_ordering(g, vertex_queue, permutation, color, degree,
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| 272 | index_map);
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| 273 | }
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| 274 |
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| 275 |
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| 276 | template < class Graph, class OutputIterator,
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| 277 | class ColorMap, class DegreeMap, class VertexIndexMap>
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| 278 | OutputIterator
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| 279 | king_ordering(const Graph& G, OutputIterator permutation,
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| 280 | ColorMap color, DegreeMap degree, VertexIndexMap index_map)
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| 281 | {
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| 282 | if (vertices(G).first == vertices(G).second)
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| 283 | return permutation;
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| 284 |
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| 285 | typedef typename boost::graph_traits<Graph>::vertex_descriptor Vertex;
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| 286 | typedef typename boost::graph_traits<Graph>::vertex_iterator VerIter;
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| 287 | typedef typename property_traits<ColorMap>::value_type ColorValue;
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| 288 | typedef color_traits<ColorValue> Color;
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| 289 |
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| 290 | std::deque<Vertex> vertex_queue;
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| 291 |
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| 292 | // Mark everything white
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| 293 | BGL_FORALL_VERTICES_T(v, G, Graph) put(color, v, Color::white());
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| 294 |
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| 295 | // Find one vertex from each connected component
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| 296 | BGL_FORALL_VERTICES_T(v, G, Graph) {
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| 297 | if (get(color, v) == Color::white()) {
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| 298 | depth_first_visit(G, v, dfs_visitor<>(), color);
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| 299 | vertex_queue.push_back(v);
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| 300 | }
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| 301 | }
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| 302 |
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| 303 | // Find starting nodes for all vertices
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| 304 | // TBD: How to do this with a directed graph?
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| 305 | for (typename std::deque<Vertex>::iterator i = vertex_queue.begin();
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| 306 | i != vertex_queue.end(); ++i)
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| 307 | *i = find_starting_node(G, *i, color, degree);
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| 308 |
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| 309 | return king_ordering(G, vertex_queue, permutation, color, degree,
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| 310 | index_map);
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| 311 | }
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| 312 |
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| 313 | template<typename Graph, typename OutputIterator, typename VertexIndexMap>
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| 314 | OutputIterator
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| 315 | king_ordering(const Graph& G, OutputIterator permutation,
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| 316 | VertexIndexMap index_map)
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| 317 | {
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| 318 | if (vertices(G).first == vertices(G).second)
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| 319 | return permutation;
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| 320 |
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| 321 | typedef out_degree_property_map<Graph> DegreeMap;
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| 322 | std::vector<default_color_type> colors(num_vertices(G));
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| 323 | return king_ordering(G, permutation,
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| 324 | make_iterator_property_map(&colors[0], index_map,
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| 325 | colors[0]),
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| 326 | make_out_degree_map(G), index_map);
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| 327 | }
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| 328 |
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| 329 | template<typename Graph, typename OutputIterator>
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| 330 | inline OutputIterator
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| 331 | king_ordering(const Graph& G, OutputIterator permutation)
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| 332 | { return king_ordering(G, permutation, get(vertex_index, G)); }
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| 333 |
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| 334 | } // namespace boost
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| 335 |
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| 336 |
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| 337 | #endif // BOOST_GRAPH_KING_HPP
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