1 | //
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2 | //=======================================================================
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3 | // Copyright 1997, 1998, 1999, 2000 University of Notre Dame.
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4 | // Authors: Andrew Lumsdaine, Lie-Quan Lee, Jeremy G. Siek
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5 | // Doug Gregor, D. Kevin McGrath
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6 | //
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7 | // This file is part of the Boost Graph Library
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8 | //
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9 | // You should have received a copy of the License Agreement for the
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10 | // Boost Graph Library along with the software; see the file LICENSE.
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11 | // If not, contact Office of Research, University of Notre Dame, Notre
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12 | // Dame, IN 46556.
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13 | //
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14 | // Permission to modify the code and to distribute modified code is
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15 | // granted, provided the text of this NOTICE is retained, a notice that
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16 | // the code was modified is included with the above COPYRIGHT NOTICE and
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17 | // with the COPYRIGHT NOTICE in the LICENSE file, and that the LICENSE
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18 | // file is distributed with the modified code.
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19 | //
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20 | // LICENSOR MAKES NO REPRESENTATIONS OR WARRANTIES, EXPRESS OR IMPLIED.
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21 | // By way of example, but not limitation, Licensor MAKES NO
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22 | // REPRESENTATIONS OR WARRANTIES OF MERCHANTABILITY OR FITNESS FOR ANY
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23 | // PARTICULAR PURPOSE OR THAT THE USE OF THE LICENSED SOFTWARE COMPONENTS
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24 | // OR DOCUMENTATION WILL NOT INFRINGE ANY PATENTS, COPYRIGHTS, TRADEMARKS
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25 | // OR OTHER RIGHTS.
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26 | //=======================================================================
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27 | //
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28 | #ifndef BOOST_GRAPH_KING_HPP
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29 | #define BOOST_GRAPH_KING_HPP
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30 |
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31 | #include <boost/config.hpp>
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32 | #include <boost/graph/detail/sparse_ordering.hpp>
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33 |
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34 | /*
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35 | King Algorithm for matrix reordering
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36 | */
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37 |
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38 | namespace boost {
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39 | namespace detail {
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40 | template<typename OutputIterator, typename Buffer, typename Compare,
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41 | typename PseudoDegreeMap, typename VecMap, typename VertexIndexMap>
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42 | class bfs_king_visitor:public default_bfs_visitor
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43 | {
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44 | public:
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45 | bfs_king_visitor(OutputIterator *iter, Buffer *b, Compare compare,
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46 | PseudoDegreeMap deg, std::vector<int> loc, VecMap color,
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47 | VertexIndexMap vertices):
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48 | permutation(iter), Qptr(b), degree(deg), comp(compare),
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49 | Qlocation(loc), colors(color), vertex_map(vertices) { }
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50 |
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51 | template <typename Vertex, typename Graph>
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52 | void finish_vertex(Vertex, Graph& g) {
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53 | typename graph_traits<Graph>::out_edge_iterator ei, ei_end;
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54 | Vertex v, w;
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55 |
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56 | typedef typename std::deque<Vertex>::iterator iterator;
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57 | typedef typename std::deque<Vertex>::reverse_iterator reverse_iterator;
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58 |
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59 | reverse_iterator rend = Qptr->rend()-index_begin;
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60 | reverse_iterator rbegin = Qptr->rbegin();
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61 |
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62 |
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63 | //heap the vertices already there
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64 | std::make_heap(rbegin, rend, boost::bind<bool>(comp, _2, _1));
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65 |
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66 | int i = 0;
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67 |
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68 | for(i = index_begin; i != Qptr->size(); ++i){
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69 | colors[get(vertex_map, (*Qptr)[i])] = 1;
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70 | Qlocation[get(vertex_map, (*Qptr)[i])] = i;
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71 | }
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72 |
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73 | i = 0;
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74 |
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75 | for( ; rbegin != rend; rend--){
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76 | percolate_down<Vertex>(i);
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77 | w = (*Qptr)[index_begin+i];
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78 | for (tie(ei, ei_end) = out_edges(w, g); ei != ei_end; ++ei) {
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79 | v = target(*ei, g);
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80 | put(degree, v, get(degree, v) - 1);
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81 |
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82 | if (colors[get(vertex_map, v)] == 1) {
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83 | percolate_up<Vertex>(get(vertex_map, v), i);
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84 | }
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85 | }
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86 |
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87 | colors[get(vertex_map, w)] = 0;
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88 | i++;
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89 | }
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90 | }
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91 |
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92 | template <typename Vertex, typename Graph>
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93 | void examine_vertex(Vertex u, const Graph&) {
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94 |
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95 | *(*permutation)++ = u;
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96 | index_begin = Qptr->size();
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97 |
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98 | }
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99 | protected:
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100 |
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101 |
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102 | //this function replaces pop_heap, and tracks state information
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103 | template <typename Vertex>
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104 | void percolate_down(int offset){
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105 | typedef typename std::deque<Vertex>::reverse_iterator reverse_iterator;
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106 |
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107 | int heap_last = index_begin + offset;
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108 | int heap_first = Qptr->size() - 1;
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109 |
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110 | //pop_heap functionality:
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111 | //swap first, last
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112 | std::swap((*Qptr)[heap_last], (*Qptr)[heap_first]);
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113 |
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114 | //swap in the location queue
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115 | std::swap(Qlocation[heap_first], Qlocation[heap_last]);
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116 |
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117 | //set drifter, children
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118 | int drifter = heap_first;
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119 | int drifter_heap = Qptr->size() - drifter;
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120 |
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121 | int right_child_heap = drifter_heap * 2 + 1;
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122 | int right_child = Qptr->size() - right_child_heap;
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123 |
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124 | int left_child_heap = drifter_heap * 2;
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125 | int left_child = Qptr->size() - left_child_heap;
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126 |
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127 | //check that we are staying in the heap
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128 | bool valid = (right_child < heap_last) ? false : true;
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129 |
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130 | //pick smallest child of drifter, and keep in mind there might only be left child
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131 | int smallest_child = (valid && get(degree, (*Qptr)[left_child]) > get(degree,(*Qptr)[right_child])) ?
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132 | right_child : left_child;
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133 |
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134 | while(valid && smallest_child < heap_last && comp((*Qptr)[drifter], (*Qptr)[smallest_child])){
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135 |
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136 | //if smallest child smaller than drifter, swap them
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137 | std::swap((*Qptr)[smallest_child], (*Qptr)[drifter]);
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138 | std::swap(Qlocation[drifter], Qlocation[smallest_child]);
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139 |
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140 | //update the values, run again, as necessary
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141 | drifter = smallest_child;
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142 | drifter_heap = Qptr->size() - drifter;
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143 |
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144 | right_child_heap = drifter_heap * 2 + 1;
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145 | right_child = Qptr->size() - right_child_heap;
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146 |
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147 | left_child_heap = drifter_heap * 2;
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148 | left_child = Qptr->size() - left_child_heap;
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149 |
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150 | valid = (right_child < heap_last) ? false : true;
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151 |
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152 | smallest_child = (valid && get(degree, (*Qptr)[left_child]) > get(degree,(*Qptr)[right_child])) ?
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153 | right_child : left_child;
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154 | }
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155 |
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156 | }
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157 |
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158 |
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159 |
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160 | // this is like percolate down, but we always compare against the
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161 | // parent, as there is only a single choice
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162 | template <typename Vertex>
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163 | void percolate_up(int vertex, int offset){
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164 |
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165 | int child_location = Qlocation[vertex];
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166 | int heap_child_location = Qptr->size() - child_location;
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167 | int heap_parent_location = (int)(heap_child_location/2);
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168 | int parent_location = Qptr->size() - heap_parent_location;
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169 |
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170 | bool valid = (heap_parent_location != 0 && child_location > index_begin + offset &&
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171 | parent_location < Qptr->size());
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172 |
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173 | while(valid && comp((*Qptr)[child_location], (*Qptr)[parent_location])){
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174 |
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175 | //swap in the heap
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176 | std::swap((*Qptr)[child_location], (*Qptr)[parent_location]);
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177 |
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178 | //swap in the location queue
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179 | std::swap(Qlocation[child_location], Qlocation[parent_location]);
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180 |
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181 | child_location = parent_location;
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182 | heap_child_location = heap_parent_location;
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183 | heap_parent_location = (int)(heap_child_location/2);
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184 | parent_location = Qptr->size() - heap_parent_location;
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185 | valid = (heap_parent_location != 0 && child_location > index_begin + offset);
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186 | }
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187 | }
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188 |
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189 | OutputIterator *permutation;
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190 | int index_begin;
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191 | Buffer *Qptr;
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192 | PseudoDegreeMap degree;
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193 | Compare comp;
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194 | std::vector<int> Qlocation;
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195 | VecMap colors;
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196 | VertexIndexMap vertex_map;
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197 | };
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198 |
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199 |
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200 | } // namespace detail
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201 |
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202 |
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203 | template<class Graph, class OutputIterator, class ColorMap, class DegreeMap,
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204 | typename VertexIndexMap>
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205 | OutputIterator
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206 | king_ordering(const Graph& g,
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207 | std::deque< typename graph_traits<Graph>::vertex_descriptor >
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208 | vertex_queue,
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209 | OutputIterator permutation,
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210 | ColorMap color, DegreeMap degree,
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211 | VertexIndexMap index_map)
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212 | {
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213 | typedef typename property_traits<DegreeMap>::value_type DS;
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214 | typedef typename property_traits<ColorMap>::value_type ColorValue;
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215 | typedef color_traits<ColorValue> Color;
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216 | typedef typename graph_traits<Graph>::vertex_descriptor Vertex;
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217 | typedef iterator_property_map<typename std::vector<DS>::iterator, VertexIndexMap, DS, DS&> PseudoDegreeMap;
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218 | typedef indirect_cmp<PseudoDegreeMap, std::less<DS> > Compare;
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219 | typedef typename boost::sparse::sparse_ordering_queue<Vertex> queue;
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220 | typedef typename detail::bfs_king_visitor<OutputIterator, queue, Compare,
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221 | PseudoDegreeMap, std::vector<int>, VertexIndexMap > Visitor;
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222 | typedef typename graph_traits<Graph>::vertices_size_type
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223 | vertices_size_type;
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224 | std::vector<DS> pseudo_degree_vec(num_vertices(g));
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225 | PseudoDegreeMap pseudo_degree(pseudo_degree_vec.begin(), index_map);
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226 |
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227 | typename graph_traits<Graph>::vertex_iterator ui, ui_end;
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228 | queue Q;
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229 | // Copy degree to pseudo_degree
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230 | // initialize the color map
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231 | for (tie(ui, ui_end) = vertices(g); ui != ui_end; ++ui){
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232 | put(pseudo_degree, *ui, get(degree, *ui));
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233 | put(color, *ui, Color::white());
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234 | }
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235 |
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236 | Compare comp(pseudo_degree);
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237 | std::vector<int> colors(num_vertices(g));
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238 |
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239 | for(vertices_size_type i = 0; i < num_vertices(g); i++)
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240 | colors[i] = 0;
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241 |
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242 | std::vector<int> loc(num_vertices(g));
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243 |
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244 | //create the visitor
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245 | Visitor vis(&permutation, &Q, comp, pseudo_degree, loc, colors, index_map);
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246 |
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247 | while( !vertex_queue.empty() ) {
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248 | Vertex s = vertex_queue.front();
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249 | vertex_queue.pop_front();
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250 |
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251 | //call BFS with visitor
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252 | breadth_first_visit(g, s, Q, vis, color);
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253 | }
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254 |
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255 | return permutation;
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256 | }
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257 |
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258 |
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259 | // This is the case where only a single starting vertex is supplied.
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260 | template <class Graph, class OutputIterator,
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261 | class ColorMap, class DegreeMap, typename VertexIndexMap>
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262 | OutputIterator
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263 | king_ordering(const Graph& g,
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264 | typename graph_traits<Graph>::vertex_descriptor s,
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265 | OutputIterator permutation,
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266 | ColorMap color, DegreeMap degree, VertexIndexMap index_map)
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267 | {
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268 |
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269 | std::deque< typename graph_traits<Graph>::vertex_descriptor > vertex_queue;
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270 | vertex_queue.push_front( s );
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271 | return king_ordering(g, vertex_queue, permutation, color, degree,
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272 | index_map);
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273 | }
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274 |
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275 |
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276 | template < class Graph, class OutputIterator,
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277 | class ColorMap, class DegreeMap, class VertexIndexMap>
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278 | OutputIterator
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279 | king_ordering(const Graph& G, OutputIterator permutation,
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280 | ColorMap color, DegreeMap degree, VertexIndexMap index_map)
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281 | {
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282 | if (vertices(G).first == vertices(G).second)
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283 | return permutation;
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284 |
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285 | typedef typename boost::graph_traits<Graph>::vertex_descriptor Vertex;
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286 | typedef typename boost::graph_traits<Graph>::vertex_iterator VerIter;
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287 | typedef typename property_traits<ColorMap>::value_type ColorValue;
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288 | typedef color_traits<ColorValue> Color;
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289 |
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290 | std::deque<Vertex> vertex_queue;
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291 |
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292 | // Mark everything white
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293 | BGL_FORALL_VERTICES_T(v, G, Graph) put(color, v, Color::white());
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294 |
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295 | // Find one vertex from each connected component
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296 | BGL_FORALL_VERTICES_T(v, G, Graph) {
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297 | if (get(color, v) == Color::white()) {
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298 | depth_first_visit(G, v, dfs_visitor<>(), color);
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299 | vertex_queue.push_back(v);
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300 | }
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301 | }
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302 |
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303 | // Find starting nodes for all vertices
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304 | // TBD: How to do this with a directed graph?
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305 | for (typename std::deque<Vertex>::iterator i = vertex_queue.begin();
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306 | i != vertex_queue.end(); ++i)
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307 | *i = find_starting_node(G, *i, color, degree);
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308 |
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309 | return king_ordering(G, vertex_queue, permutation, color, degree,
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310 | index_map);
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311 | }
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312 |
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313 | template<typename Graph, typename OutputIterator, typename VertexIndexMap>
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314 | OutputIterator
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315 | king_ordering(const Graph& G, OutputIterator permutation,
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316 | VertexIndexMap index_map)
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317 | {
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318 | if (vertices(G).first == vertices(G).second)
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319 | return permutation;
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320 |
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321 | typedef out_degree_property_map<Graph> DegreeMap;
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322 | std::vector<default_color_type> colors(num_vertices(G));
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323 | return king_ordering(G, permutation,
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324 | make_iterator_property_map(&colors[0], index_map,
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325 | colors[0]),
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326 | make_out_degree_map(G), index_map);
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327 | }
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328 |
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329 | template<typename Graph, typename OutputIterator>
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330 | inline OutputIterator
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331 | king_ordering(const Graph& G, OutputIterator permutation)
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332 | { return king_ordering(G, permutation, get(vertex_index, G)); }
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333 |
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334 | } // namespace boost
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335 |
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336 |
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337 | #endif // BOOST_GRAPH_KING_HPP
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